dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002717_13|CGC1
Gene ID: MGYG000002717_00287
Location and strand information: 37 - 2094 (+)
Family: 8.A.46.1.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002717_13|CGC1
Gene ID: MGYG000002717_00288
Location and strand information: 2109 - 3836 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002717_13|CGC1
Gene ID: MGYG000002717_00289
Location and strand information: 3970 - 5244 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002717_13|CGC1
Gene ID: MGYG000002717_00290
Location and strand information: 5267 - 6676 (+)
Family: GH140
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.0294
Protein molecular weight: 54239.25
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002717_13|CGC1
Gene ID: MGYG000002717_00291
Location and strand information: 6699 - 11150 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002717_13|CGC1
Gene ID: MGYG000002717_00292
Location and strand information: 11236 - 12390 (+)
Family: PL10_1|CE19
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.0032
Protein molecular weight: 43729.36
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002717_13|CGC1
Gene ID: MGYG000002717_00293
Location and strand information: 12378 - 16832 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002717_13|CGC1
Gene ID: MGYG000002717_00294
Location and strand information: 16985 - 18193 (-)
Family: PL10_1|CE19
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.1595
Protein molecular weight: 45459.53
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002717_13|CGC1
Gene ID: MGYG000002717_00295
Location and strand information: 18328 - 19293 (-)
Family: null
Protein type: null
Protein description: Starch-binding protein SusD

Gene clsuter ID: MGYG000002717_13|CGC1
Gene ID: MGYG000002717_00296
Location and strand information: 19330 - 19860 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002717_13|CGC1
Gene ID: MGYG000002717_00297
Location and strand information: 19881 - 22874 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002717_13|CGC1
Gene ID: MGYG000002717_00298
Location and strand information: 22934 - 23062 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002717_13|CGC1
Gene ID: MGYG000002717_00299
Location and strand information: 23188 - 24504 (-)
Family: CE7
Protein type: CAZyme
Protein description: Acetyl esterase Axe7A
Protein isoelectric point: 6.9248
Protein molecular weight: 49352.49
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002717_13|CGC1
Gene ID: MGYG000002717_00300
Location and strand information: 24549 - 26216 (-)
Family: CE12|CE4|CE8
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.1835
Protein molecular weight: 62133.35
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002717_13|CGC1
Gene ID: MGYG000002717_00301
Location and strand information: 26365 - 26712 (+)
Family: AraC_binding
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002717_13|CGC1
Gene ID: MGYG000002717_00302
Location and strand information: 26803 - 27771 (-)
Family: CE8
Protein type: CAZyme
Protein description: Pectinesterase A
Protein isoelectric point: 7.8711
Protein molecular weight: 36141.16
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002717_13|CGC1
Gene ID: MGYG000002717_00303
Location and strand information: 27776 - 28996 (-)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 7.6752
Protein molecular weight: 47091.83
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002717_00290	GH140_e1\|3.2.1.-	pectin
MGYG000002717_00292
MGYG000002717_00294
MGYG000002717_00299	CE7_e24
MGYG000002717_00300	CE8_e6\|CE4_e36\|CE12_e9
MGYG000002717_00302	CE8_e34
MGYG000002717_00303	GH105_e8\|3.2.1.-	pectin

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002717_00287	hypothetical protein	TC	37	2094	+	8.A.46.1.3
MGYG000002717_00288	hypothetical protein	null	2109	3836	+	No domain
MGYG000002717_00289	hypothetical protein	null	3970	5244	+	DUF1593\| DUF5060
MGYG000002717_00290	hypothetical protein	CAZyme	5267	6676	+	GH140
MGYG000002717_00291	Sensor histidine kinase RcsC	TF	6699	11150	-	HTH_AraC
MGYG000002717_00292	hypothetical protein	CAZyme	11236	12390	+	PL10_1\| CE19
MGYG000002717_00293	Sensor histidine kinase RcsC	TF	12378	16832	+	HTH_AraC+HTH_AraC
MGYG000002717_00294	hypothetical protein	CAZyme	16985	18193	-	PL10_1\| CE19
MGYG000002717_00295	Starch-binding protein SusD	null	18328	19293	-	SusD_RagB
MGYG000002717_00296	hypothetical protein	null	19330	19860	-	SusD-like_3
MGYG000002717_00297	TonB-dependent receptor SusC	TC	19881	22874	-	1.B.14.6.1
MGYG000002717_00298	hypothetical protein	null	22934	23062	-	No domain
MGYG000002717_00299	Acetyl esterase Axe7A	CAZyme	23188	24504	-	CE7
MGYG000002717_00300	hypothetical protein	CAZyme	24549	26216	-	CE12\| CE4\| CE8
MGYG000002717_00301	hypothetical protein	STP	26365	26712	+	AraC_binding
MGYG000002717_00302	Pectinesterase A	CAZyme	26803	27771	-	CE8
MGYG000002717_00303	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	27776	28996	-	GH105
Protein ID	Protein Name	Type	Start	End	Strand	Signature